We develop GNet, a scalable and flexible Gaussian process network with nonparametric activation functions modeled by Gaussian processes. To reduce computational and storage costs, we introduce the jointly inverse Kalman filter, a fast algorithm together with closed-form expressions of gradients for accelerating model training and predictions without the need to form covariance matrices. Using a unified optimization setting, GNet shows competitive performance across a diverse range of test problems, including predicting nonlinear functions, nonparametric regression of real-world data, and predicting one-body direct correlation functions with high-dimensional inputs in classical density function theory. The strong performance of GNet, accelerated by the jointly inverse Kalman filter, suggests broad applicability to large-scale predictive modeling with substantially reduced computational and storage costs.
Gaussian process (GP) modeling is widely used in computational science and engineering. However, fitting a GP to high-dimensional inputs remains challenging due to the curse of dimensionality. While various methods have been proposed to reduce input dimensionality, they typically…
Gaussian process inference is often limited by cubic computational costs, a challenge that becomes more pronounced in spatio-temporal settings where posterior inference is required over dense grids. While state-space SPDE formulations enable linear complexity in time, exact infer…
Many real-world processes can be represented as compositions of functions along a directed acyclic graph (DAG). In causal modelling, these correspond to the underlying mechanisms; in engineering, to multiple fidelity levels; and in gene-regulatory networks, to transcription facto…
Distance-based classifiers are very popular, and the Euclidean distance is one of the most commonly used metrics in distance-based classifiers. However, classifiers based on the Euclidean distance often suffer in high-dimensional setups due to issues such as distance concentratio…
Changepoint detection methods have seen considerable development in recent years, with online algorithms capable of identifying structural changes in streaming data in near real time. However, the majority of existing methods are designed under the assumption of IID observations,…
High-dimensional categorical data arise in genetics, biomedicine, and the social sciences, yet visualization tools for such data remain far less developed than those for continuous variables. Existing methods either scale poorly, rely heavily on low-dimensional displays detached…