Unique and rapid classification of knots and links is an open mathematical problem that is relevant to a range of (bio)physical systems, including polymer melts, DNA, and proteins. In this paper, we explore a data-driven approach to the classification problem of link topology. Extending the framework introduced in Ref. 1 (Sleiman et al, 2024 Soft Matter, 20(1), pp.71-78), we show that a feedforward neural network trained on the writhe density matrix classifies thermally equilibrated configurations of the first six prime links with 97% accuracy. We demonstrate that this accuracy remains high across a range of temperatures and lengths of link components, while rapidly deteriorating with the addition of topology-altering Gaussian noise; a result consistent with the writhe density matrix containing features sensitive to topology. Our results show that neural networks based on the writhe density matrix efficiently classify two-component links, establishing machine learning as a promising tool for rapid classification of more complex link topologies, e.g. Borromean rings and multi-component links, as the computational cost of exact numerical calculation of topological invariants becomes prohibitive.
Fast prediction of the response of adhesive soft viscoelastic contacts represents a current challenge in soft robotics and for gripping and manipulation tasks. Determining the complete time-resolved force trajectory requires full numerical simulations, whose computational cost is…
We study layered models, including feedforward networks, ResNets, and transformers, by limiting each layer to a width of $d = 3$, i.e., $\mathbb{R}^3$ as representation space. This allows us to track how a neural network changes low-dimensional topological invariants through its…
Male infertility is a significant yet often underdiagnosed aspect of reproductive health, with semen analysis serving as the cornerstone of clinical evaluation. To address this problem, this study investigates the use of machine learning algorithms to classify male fertility stat…
Organic mixed ionic electronic conductors (OMIECs) are a promising class of polymer materials for applications spanning neuromorphic computation to energy efficient electronics and bioelectronics. Despite being highly tunable, the relationship between structural features and key…
Modern video games are becoming more complex day by day. Most of these modern games are multiplayer first-person shooter (FPS) games. The rising popularity of FPS games emphasizes the need to combat cheating for fair and enjoyable gaming. As the number of players using cheating t…
Extreme Learning Machine (ELM) computes output weights analytically using the Moore-Penrose pseudoinverse. Although this leads to fast training, its numerical stability depends strongly on the conditioning of the hidden layer matrix. This paper studies pseudoinverse-based ELM fro…